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PARN


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Gene DB Home
Symbol:PARN
Name(s):poly(A)-specific ribonuclease (deadenylation nuclease)
Type:protein-coding
Organism:Homo sapiens
Synonyms:DAN
Links: Pubmed, Entrez Gene, GeneCards, BioGPS, Map Viewer.

Gene Information from Publications

Publication Link Summary of findings
16281054 The crystal structure of C-terminal truncated human PARN determined in two states (free and RNA-bound forms) reveals that PARN is folded into two domains, an R3H domain and a nuclease domain
15358788 study of binding and coordination of divalent metal ions in the active site of PARN
11742007 residues of human PARN, Asp(28), Glu(30), Asp(292), and Asp(382), are essential for catalysis but are not required for stabilization of the PARN x RNA substrate complex.
17391638 The entire RNA-recognition motif (RRM) domain not only contributes to the substrate binding and efficient catalysis of PARN, but also stabilizes the overall structures of the protein.
16601207 CUG-BP binds specifically to both of these RNAs and stimulates poly(A) shortening by PARN. Moreover, CUG-BP interacts with PARN in extracts by coimmunoprecipitation, and this interaction can be recapitulated using recombinant proteins
16317009 Association of CBC with PARN might have importance in the regulated recruitment of PARN to the nonsense-mediated decay pathway during the pioneer round of translation.
12748283 Results show that tristetraprolin can promote the deadenylation of AU-rich element (ARE)-containing, polyadenylated substrates by poly(A) RNase.
11424938 Xenopus oocytes contain cytoplasmic (p62) and nuclear (p74) isoforms of PARN. p62 is proteolytically derived from p74. Both isoforms are expressed throughout oogenesis and early development.
11359775 The m7GpppG cap has multiple effects on PARN activity. In cis, the 5'cap stimulates deadenylation by increasing PARN processivity. In trans, low concentrations of cap stimulate PARN activity whereas high concentrations inhibit deadenylation.
9736620 PARN is a poly(A)-specific member of the RNase D family of 3' exoribonucleases. It is distributed between the nucleus and the cytoplasm and is not stably associated with ribosomes. Xenopus PARN catalyzes deadenylation during oocyte maturation.

View more information from publications.

Interacting gene products

Interaction Type Gene 1 Gene 2 Interaction description Complex Publication Link
HPRDpoly(A)-specific ribonucleaseKH-type splicing regulatory protein--Pubmed
HPRDpoly(A)-specific ribonucleaseKH-type splicing regulatory protein--Pubmed
HPRDpoly(A)-specific ribonucleaseM-phase phosphoprotein 6--Pubmed

Recent Publications on PARN:

Pubmed Logo
Do distinct populations of dorsal root ganglion neurons account for the sensory peptidergic innervation of the kidney?
Peptidergic afferent renal nerves (PARN) have been linked to kidney damage...
21st August, 2009
Department of Internal Medicine 4, Nephrology, and Hypertension, Am J Physiol Renal Physiol. 2009 Nov;297(5):F1427-34. Epub 2009 Aug 19.
DOI Direct Link
Sex-specific fitness correlates of dispersal in a house sparrow metapopulation.
1. Dispersal affects many important ecological and evolutionary processes....
14th August, 2009
Department of Biology, Centre for Conservation Biology, Norwegian J Anim Ecol. 2009 Nov;78(6):1216-25. Epub 2009 Aug 6.
DOI Direct Link
Competitive inhibition of human poly(A)-specific ribonuclease (PARN) by synthetic fluoro-pyranosyl nucleosides.
Poly(A)-specific ribonuclease (PARN) is a cap-interacting deadenylase that...
14th August, 2009
Department of Biochemistry & Biotechnology, University of Thessaly, 26 Biochemistry. 2009 Jul 7;48(26):6044-51.
DOI Direct Link
Inhibition of human poly(A)-specific ribonuclease (PARN) by purine nucleotides: kinetic analysis.
Poly(A)-specific ribonuclease (PARN) is a cap-interacting and...
6th August, 2009
Department of Biochemistry and Biotechnology, University of Thessaly, J Enzyme Inhib Med Chem. 2009 Apr;24(2):516-23.
DOI Direct Link
Second-generation de novo design: a view from a medicinal chemist perspective.
For computational de novo design, a general retrospective validation work...
30th June, 2009
Center for Bioinformatics, University of Hamburg, Bundesstrasse 43, 20146, J Comput Aided Mol Des. 2009 Jun 27.
DOI Direct Link

View more research publications.

Patents:

Patents logo
US Patent No.Title
5220656 System for selecting control parameter for microinstruction execution unit using parameters and parameter selection signal decoded from instruction
5938234 Vehicle airbag deactivation switch with interchangeable cylinders
5950214 System, method, and computer program product for accessing a note database having subnote information for the purpose of manipulating subnotes linked to portions of documents
5965382 Nucleic acid encoding secreted Mac-2 binding glycoprotein
5991780 Computer based system, method, and computer program product for selectively displaying patent text and images

View more patents.

PARN results (if any) from reagent suppliers

Google CSE Logo
PARN antibody (ab27778) | Abcam
Rabbit polyclonal to PARN. A 3' exoribonuclease that has a preference for poly(A ) tails of mRNAs, thereby efficiently degrading poly(A) tails.
http://www.abcam.com/PARN-antibody-ab27778.html...

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PARN Antibody / PARN Antibodies
PARN Antibody / PARN Antibodies. ... PARN specific siRNA, sHRNA Plasmid and shRNA Lentiviral Particles gene silencers are also available. ...
http://www.scbt.com/table-parn.html...

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PARN (A42) Antibody
ribonuclease (PARN) is the enzyme responsible for initiation of deadenylation and exonucleolytic ... an evolutionarily conserved mechanism, PARN also trans-
...
http://www.cellsignal.com/pdf/3894.pdf...

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PARN siRNA (m) sc-61298
Click here for details. suitable control antibody: PARN (N-20): sc-47619; sqRT- PCR Primer also available: PARN (m)-PR: sc-61298-PR, 20 µl ...
http://www.scbt.com/datasheet-61298-parn-sirna-m.html...

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PARN (P620) Antibody #3899
Poly(A)-specific ribonuclease (PARN) is the enzyme responsible for initiation of deadenylation and exonucleolytic shortening of mRNA transcripts. ...
http://www.cellsignal.com/products/3899.html...

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PARN antibodies: Chromatin and Nuclear Signaling > DNA / RNA > RNA ...
PARN antibodies. ... PARN antibody. IHC-P, WB, ICC/IF. Images · Customer Abreviews: 3 stars (out of 5). Rabbit polyclonal ...
http://www.abcam.com/index.html?t=131984&pt=1&c=3276&ei=&mu=...

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PARN (P620) Antibody
cific ribonuclease (PARN) is the enzyme responsible for initiation of deadenylation and ... mechanism, PARN also translationally silences selective
...
http://www.cellsignal.com/pdf/3899.pdf...

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